Installation guide

Main package

The graphvelo package can be installed via pip:

pip install graphvelo

Note

To avoid potential dependency conflicts, installing within a conda environment is recommended.

Optional dependencies

Our graphvelo package serves as a seamlessly plugin in RNA velocity analyses pipeline and uses external tools such as scvelo, cellrank, dynamo.

You may install scvelo following the official guide.

You may install cellrank following the official guide.

You may install dynamo following the official guide.

Now you are all set. Proceed to tutorials for how to use the graphvelo package.